In this thesis we present and study overlapping additive Schwarz preconditioner for the isogeometric discretization of reaction-diffusion systems modeling the heart bioelectrical activity, known as the Bidomain and Monodomain models. The cardiac Bidomain model consists of a degenerate system of parabolic and elliptic PDE, whereas the simplified Monodomain model consists of a single parabolic equation. These models include intramural fiber rotation, anisotropic conductivity coefficients and are coupled through the reaction term with a system of ODEs, which models the ionic currents of the cellular membrane. The overlapping Schwarz preconditioner is applied with a PCG accelerator to solve the linear system arising at each time step from the isogeometric discretization in space and a semi-implicit adaptive method in time. A theoretical convergence rate analysis shows that the resulting solver is scalable, optimal in the ratio of subdomain/element size and the convergence rate improves with increasing overlap size. Numerical tests in three-dimensional ellipsoidal domains confirm the theoretical estimates and additionally show the robustness with respect to jump discontinuities of the orthotropic conductivity coefficients.
ISOGEOMETRIC OVERLAPPING ADDITIVE SCHWARZ PRECONDITIONERS IN COMPUTATIONAL ELECTROCARDIOLOGY
CHARAWI, LARA ANTONELLA
2014
Abstract
In this thesis we present and study overlapping additive Schwarz preconditioner for the isogeometric discretization of reaction-diffusion systems modeling the heart bioelectrical activity, known as the Bidomain and Monodomain models. The cardiac Bidomain model consists of a degenerate system of parabolic and elliptic PDE, whereas the simplified Monodomain model consists of a single parabolic equation. These models include intramural fiber rotation, anisotropic conductivity coefficients and are coupled through the reaction term with a system of ODEs, which models the ionic currents of the cellular membrane. The overlapping Schwarz preconditioner is applied with a PCG accelerator to solve the linear system arising at each time step from the isogeometric discretization in space and a semi-implicit adaptive method in time. A theoretical convergence rate analysis shows that the resulting solver is scalable, optimal in the ratio of subdomain/element size and the convergence rate improves with increasing overlap size. Numerical tests in three-dimensional ellipsoidal domains confirm the theoretical estimates and additionally show the robustness with respect to jump discontinuities of the orthotropic conductivity coefficients.File | Dimensione | Formato | |
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https://hdl.handle.net/20.500.14242/172473
URN:NBN:IT:UNIMI-172473