The accuracy of protein synthesis mainly relies on a wide range of specific tRNA modifications that fine-tune codon decoding. Among them, galactosyl-queuosine (galQ), a glycosylated derivative of queuosine, is uniquely installed at the wobble position of human tRNATyr, yet its cellular function remains poorly understood. In this work, we investigated the role of galQ in cancer by modulating the expression of QTGAL, the enzyme responsible for its biosynthesis, using siRNA-mediated knockdown in triple- negative breast cancer (TNBC) cell lines. These models were analyzed via molecular assays and high-throughput platforms including RNA-seq, Nano-tRNA-seq, and RiboLace. Our findings show that galQ is essential for translational balance in TNBC. Its loss leads to reduced proliferation, increased stop codon readthrough, and ribosome stalling in 3′-UTRs. Mechanistically, galQ appears to balance the decoding of the two tyrosine codons (UAU and UAC), optimizing fidelity and preventing near cognate misincorporation. These defects are exacerbated in Ribosome Quality Control (RQC)-deficient contexts, such as FOCAD-deleted TNBC, suggesting a synthetic vulnerability. This observations position galQ as a critical, context-dependent modulator of translational fidelity. Its loss not only disrupts proteostasis but may also generate aberrant peptides with immunogenic potential. Targeting QTGAL could thus represent a promising strategy for selectively impairing tumor cell viability and enhancing antigenicity in cancers with defective translational surveillance.

tRNA queuosine galactosylation links translational fidelity to cancer vulnerability

TARULLO, MARCO
2026

Abstract

The accuracy of protein synthesis mainly relies on a wide range of specific tRNA modifications that fine-tune codon decoding. Among them, galactosyl-queuosine (galQ), a glycosylated derivative of queuosine, is uniquely installed at the wobble position of human tRNATyr, yet its cellular function remains poorly understood. In this work, we investigated the role of galQ in cancer by modulating the expression of QTGAL, the enzyme responsible for its biosynthesis, using siRNA-mediated knockdown in triple- negative breast cancer (TNBC) cell lines. These models were analyzed via molecular assays and high-throughput platforms including RNA-seq, Nano-tRNA-seq, and RiboLace. Our findings show that galQ is essential for translational balance in TNBC. Its loss leads to reduced proliferation, increased stop codon readthrough, and ribosome stalling in 3′-UTRs. Mechanistically, galQ appears to balance the decoding of the two tyrosine codons (UAU and UAC), optimizing fidelity and preventing near cognate misincorporation. These defects are exacerbated in Ribosome Quality Control (RQC)-deficient contexts, such as FOCAD-deleted TNBC, suggesting a synthetic vulnerability. This observations position galQ as a critical, context-dependent modulator of translational fidelity. Its loss not only disrupts proteostasis but may also generate aberrant peptides with immunogenic potential. Targeting QTGAL could thus represent a promising strategy for selectively impairing tumor cell viability and enhancing antigenicity in cancers with defective translational surveillance.
29-gen-2026
Inglese
FATICA, Alessandro
SAGGIO, Isabella
Università degli Studi di Roma "La Sapienza"
137
File in questo prodotto:
File Dimensione Formato  
Tesi_dottorato_Tarullo.pdf

embargo fino al 29/07/2027

Licenza: Creative Commons
Dimensione 10.25 MB
Formato Adobe PDF
10.25 MB Adobe PDF

I documenti in UNITESI sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.14242/358115
Il codice NBN di questa tesi è URN:NBN:IT:UNIROMA1-358115